© Erwan AMICE / LEMAR / CNRS Images

National research programme Marine genomes (PEPR ATLASea)

Co-piloted by the CNRS and the CEA, the ATLASea exploratory research programme aims to sequence the genomes of 4,500 marine species in France's exclusive economic zone. Funded to the tune of €41 million over 8 years as part of France 2030, the programme will help to understand, protect and study all forms of life in all their diversity.

  • Exploration national research programme
  • Programme leaders: CEA, CNRS
  • Programme directors:
    • Hugues Roest Crollius - CNRS (Institut de biologie de l'École Normale Supérieure (IBENS))
    • Patrick Wincker - CEA
  • Allocated budget: €41m over 8 years

To complement the many international initiatives to sequence biodiversity, France has just given a boost to its research into marine biodiversity. France has the second largest maritime area in the world after the United States, cutting-edge research in marine biodiversity and a strong economic fabric built around the exploitation of the marine biotope. The French government has earmarked €3 billion for research in the form of ‘Priority Research Programmes and Equipment’, known as PEPRs (directed or exploratory), which form the upstream/research component of the France 2030 strategies. ATLASea is one of the winners of the exploratory PEPRs, which target emerging scientific or technological sectors for which the French government wishes to identify and structure these communities. Sequencing a genome makes it possible to retrace the evolution of biological processes, but also to learn about an individual's genetic information, to examine how their cells function and the distribution of their genes. Access to this information for a large number of species will be crucial for the future of biology. To date, 12,000 species have been identified in the exclusive economic zone of mainland France; the ambition of the programme is to sequence the genome of several thousand of them on the mainland coast and a few hundred in the overseas territories, targeting in particular species of scientific or economic interest, notably for the discovery of new bio-based antibacterial agents, or processes for the degradation of plastic by marine organisms.

PEPR ATLASea website

ATLASea research programme: an atlas of marine genomes

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ATLASea is one of the laureates of the PEPR exploratory programmes, which target emerging scientific or technological sectors where the French government sees a need to identify and structure communities. Co-led by the CNRS and the CEA, the ATLASea programme aims to sequence the genomes of 4,500 marine species, with a high coverage of species from mainland France, but also including species from overseas territories. The selected species will be sampled by the DIVE-Sea Targeted Project. The samples will be entrusted to the SEQ-Sea Targeted Project teams to produce genome assemblies associated with high-quality structural annotations. The BYTE-Sea Targeted Project will centralise all the genomic data produced by the ATLASea project in a single portal and integrate the genomes of related organisms sequenced by other consortia.
The ATLASea programme will decipher and exploit this colossal wealth of information from marine species on the French coast. It will guarantee the interoperability and security of the data, and facilitate its dissemination and use in accordance with the FAIR and Open Science principles. Funded by a €41.3 million grant over 8 years as part of France 2030, the programme will help to understand, study and preserve a broad diversity of marine life forms.

For more information

PEPR ATLASEA - Line Le Gall nous parle du projet DIVE-Sea

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Line Le Gall, professeure spécialiste en algues au MNHN et pilote du projet DIVE-Sea répond à nos questions sur le projet.